Re: [MLUG] String manipulation in C

[Jack Smith <EMAIL:PROTECTED>]

On Mon, 2007-07-02 at 00:06 -0500, Stephen Montgomery-Smith wrote:
> I think that using the C code provided by Mark Rages (with the little 
> correction I added) is probably the easiest way to go.  If that is too 
> slow, then you probably need to put some serious thought into reducing the 
> problem (perhaps look for common bits in the short DNA sequences to make 
> the search more efficient).  This would be a serious programming project.
> 

I'll try that C code. I do have some of the sequences already
represented by regexes (it came that way!) so that would throw strstr()
for a loop... 

I would plug it in and see if it works now, but it's gotten quite late
and I have to be at work at eight tomorrow morning. Thank you to all for
the help.

Jack


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