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On Thu, 1 Apr 2004 EMAIL:PROTECTED wrote:
> > Might as well post this. I just did a search of the long list of
> > programs given here: http://linkage.rockefeller.edu/soft/
>
> Maybe your list is not a representative sample?
Right. It it represents mostly programs that do certain kinds of genetic
analysis on pedigrees, not on sequence data.
> http://www.bioperl.org/
>
> I'd venture to say that Perl is quite likely used quite a bit as the
> glue between the ASCII data streams from instruments and fancy databases
> and statistical analysis programs (e.g. SASS).
(SAS) Yes. It is really good for parsing text files in all kinds of
ways. We have also been using it to locate sequences in data files.
Mike
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